Daniel McDonald
Impact in
- Biological Psychiatry top 0.2%
- Tryptophan and brain disorders
- Molecular Biology top 0.2%
- Gut microbiota and health
- Genomics and Phylogenetic Studies
- Metabolomics and Mass Spectrometry Studies
Papers in
-
- Gut microbiota and health 56
- Genomics and Phylogenetic Studies 22
- Metabolomics and Mass Spectrometry Studies 15
- RNA and protein synthesis mechanisms 6
- Physiology 19
- Diet and metabolism studies 14
- Co-authors
- Rob Knight (91 shared papers)J. Gregory Caporaso (10 shared papers)José C. Clemente (3 shared papers)Curtis Huttenhower (2 shared papers)Dan Knights (3 shared papers)Jesse Zaneveld (3 shared papers)Morgan G. I. Langille (1 shared paper)Rebecca L. Vega Thurber (1 shared paper)
- Journals
- mSystems (21 papers)Microbiome (6 papers)Nature Biotechnology (5 papers)Nature Microbiology (4 papers)RNA (3 papers)
- Partner nations
- United StatesAustraliaBelgium
In The Last Decade
Daniel McDonald
116 papers receiving 23.2k citations
Daniel McDonald's Hit Papers
Peers
Comparison fields: 5 of 208
- Biological Psychiatry 785
- Molecular Biology 12.4k
- Ecology 4.5k
- Gastroenterology 659
- Pollution 1.5k
Countries citing papers authored by Daniel McDonald
This map shows the geographic impact of Daniel McDonald's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Daniel McDonald with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Daniel McDonald more than expected).
Fields of papers citing papers by Daniel McDonald
This network shows the impact of papers produced by Daniel McDonald. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Daniel McDonald. The network helps show where Daniel McDonald may publish in the future.
Co-authors
The 25 scholars most cited alongside Daniel McDonald, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.
All Works
Showing the 20 most-cited of 117 papers — load more, or switch the sort, to bring in the rest.
| # | Work | ||
|---|---|---|---|
| 1 | Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences Hit paper breakdown → | 2013 | 7216 |
| 2 | An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea Hit paper breakdown → | 2011 | 4033 |
| 3 | Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns Hit paper breakdown → | 2017 | 1329 |
| 4 | Dynamics of the human gut microbiome in inflammatory bowel disease Hit paper breakdown → | 2017 | 855 |
| 5 | GABA-modulating bacteria of the human gut microbiota Hit paper breakdown → | 2018 | 834 |
| 6 | Strains, functions and dynamics in the expanded Human Microbiome Project Hit paper breakdown → | 2017 | 830 |
| 7 | The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome Hit paper breakdown → | 2012 | 600 |
| 8 | 2010 | 431 | |
| 9 | Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences Hit paper breakdown → | 2014 | 427 |
| 10 | Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information Hit paper breakdown → | 2018 | 363 |
| 11 | 2012 | 356 | |
| 12 | QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data Hit paper breakdown → | 2020 | 347 |
| 13 | 2016 | 286 | |
| 14 | Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults Hit paper breakdown → | 2019 | 283 |
| 15 | 2017 | 275 | |
| 16 | 2014 | 265 | |
| 17 | High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing Hit paper breakdown → | 2021 | 237 |
| 18 | 2017 | 231 | |
| 19 | 2010 | 214 | |
| 20 | 2018 | 206 |
About Daniel McDonald
Daniel McDonald is a scholar working on Molecular Biology, Physiology, Ecology, Genetics and Materials Chemistry, having authored 117 papers that have together received 23.5k indexed citations. Recurring topics across this work include Gut microbiota and health (56 papers), Genomics and Phylogenetic Studies (22 papers), Metabolomics and Mass Spectrometry Studies (15 papers), Diet and metabolism studies (14 papers), Microbial Community Ecology and Physiology (14 papers), Microstructure and mechanical properties (7 papers), Species Distribution and Climate Change (6 papers) and RNA and protein synthesis mechanisms (6 papers). The work is most often cited by research in Biological Psychiatry (785 citations), Molecular Biology (12.4k citations), Ecology (4.5k citations), Gastroenterology (659 citations) and Pollution (1.5k citations). Daniel McDonald has collaborated with scholars based in United States, Australia and Belgium. Frequent co-authors include Rob Knight, J. Gregory Caporaso, José C. Clemente, Curtis Huttenhower, Dan Knights, Jesse Zaneveld, Morgan G. I. Langille, Rebecca L. Vega Thurber, Deron E. Burkepile and Robert G. Beiko. Their work appears in journals such as mSystems, Microbiome, Nature Biotechnology, Nature Microbiology and RNA.
Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.