D.R. Mani

24.1k citations

61 papers · 5.8k · 3 hit papers · h-index 34

Impact in

Spectroscopy top 0.2%
- Advanced Proteomics Techniques and Applications
- Mass Spectrometry Techniques and Applications
Molecular Biology top 2%
- Metabolomics and Mass Spectrometry Studies
- Ubiquitin and proteasome pathways
- Gene expression and cancer classification
- Bioinformatics and Genomic Networks
- Advanced Biosensing Techniques and Applications

Papers in

Molecular Biology 30
- Ubiquitin and proteasome pathways 8
- Protein Degradation and Inhibitors 6
- Metabolomics and Mass Spectrometry Studies 4
- Molecular Biology Techniques and Applications 4
- Receptor Mechanisms and Signaling 3
Spectroscopy 28
- Advanced Proteomics Techniques and Applications 28
- Mass Spectrometry Techniques and Applications 11

Co-authors: Steven A. Carr (39 shared papers)Karl R. Clauser (15 shared papers)Michael A. Gillette (12 shared papers)Philipp Mertins (7 shared papers)Namrata D. Udeshi (12 shared papers)Hasmik Keshishian (10 shared papers)Michael Burgess (7 shared papers)Eric Kuhn (7 shared papers)
Journals: Molecular & Cellular Proteomics (13 papers)Proceedings of the National Academy of Sciences (3 papers)Nature Communications (3 papers)Nature Biotechnology (3 papers)Cell (2 papers)
Partner nations: United States Canada Germany

In The Last Decade

D.R. Mani

58 papers receiving 5.7k citations

D.R. Mani's Hit Papers

align trajectories log scale

Proteomic analyses of ECM during pancreatic ductal adenocarcinoma progression reveal different contributions by tumor and stromal cells 2019 · 308 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2019 Proceedings of the National Academy of Sciences
2013 Nature Methods
2003 PubMed

Peers

Countries citing papers authored by D.R. Mani

Since Specialization

Citations

This map shows the geographic impact of D.R. Mani's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by D.R. Mani with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites D.R. Mani more than expected).

Fields of papers citing papers by D.R. Mani

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by D.R. Mani. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by D.R. Mani. The network helps show where D.R. Mani may publish in the future.

Co-authors

The 25 scholars most cited alongside D.R. Mani, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with D.R. Mani Line = papers co-authored together D.R. Mani links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 61 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Gene expression-based classification of malignant gliomas correlates better with survival than histological classification. PubMed ·Catherine L. Nutt, D.R. Mani, Rebecca A. Betensky, Pablo Tamayo, J. Gregory Cairncross, Christine Ladd, Ute Pohl, Christian Hartmann, Margaret E. McLaughlin, Tracy T. Batchelor, Peter M. Black, Andreas von Deimling, Scott L. Pomeroy, Todd R. Golub, David N. Louis Hit paper breakdown →	2003	720
2	Integrated proteomic analysis of post-translational modifications by serial enrichment Nature Methods ·Philipp Mertins, Jana Qiao, Jinal Patel, Namrata D. Udeshi, Karl R. Clauser, D.R. Mani, Michael Burgess, Michael A. Gillette, Jacob D. Jaffe, Steven A. Carr Hit paper breakdown →	2013	485
3	An Assessment of Software Solutions for the Analysis of Mass Spectrometry Based Quantitative Proteomics Data Journal of Proteome Research ·Lukas Mueller, Mi‐Youn Brusniak, D.R. Mani, Ruedi Aebersold	2008	352
4	Proteomic analyses of ECM during pancreatic ductal adenocarcinoma progression reveal different contributions by tumor and stromal cells Proceedings of the National Academy of Sciences ·Chenxi Tian, Karl R. Clauser, Daniel Öhlund, Steffen Rickelt, Ying Huang, Mala Gupta, D.R. Mani, Steven A. Carr, David A. Tuveson, Richard O. Hynes Hit paper breakdown →	2019	308
5	Refined Preparation and Use of Anti-diglycine Remnant (K-ε-GG) Antibody Enables Routine Quantification of 10,000s of Ubiquitination Sites in Single Proteomics Experiments Molecular & Cellular Proteomics ·Namrata D. Udeshi, Tanya Svinkina, Philipp Mertins, Eric Kuhn, D.R. Mani, Jana Qiao, Steven A. Carr	2012	268
6	Identifying the proteins to which small-molecule probes and drugs bind in cells Proceedings of the National Academy of Sciences ·Shao‐En Ong, Monica Schenone, Adam A. Margolin, Xiaoyu Li, T. Kathy, Mary Kathryn Doud, D.R. Mani, Letian Kuai, Xiang Wang, John L. Wood, Nicola Tolliday, Angela N. Koehler, Lisa A. Marcaurelle, Todd R. Golub, Robert J. Gould, Stuart L. Schreiber, Steven A. Carr	2009	239
7	Prediction of high-responding peptides for targeted protein assays by mass spectrometry Nature Biotechnology ·Vincent A. Fusaro, D.R. Mani, Jill P. Mesirov, Steven A. Carr	2009	233
8	Quantification of Cardiovascular Biomarkers in Patient Plasma by Targeted Mass Spectrometry and Stable Isotope Dilution Molecular & Cellular Proteomics ·Hasmik Keshishian, Terri A. Addona, Michael Burgess, D.R. Mani, Xu Shi, Eric Kuhn, Marc S. Sabatine, Robert E. Gerszten, Steven A. Carr	2009	232
9	Developing Multiplexed Assays for Troponin I and Interleukin-33 in Plasma by Peptide Immunoaffinity Enrichment and Targeted Mass Spectrometry Clinical Chemistry ·Eric Kuhn, Terri A. Addona, Hasmik Keshishian, Michael Burgess, D.R. Mani, Richard Lee, Marc S. Sabatine, Robert E. Gerszten, Steven A. Carr	2009	198
10	A pipeline that integrates the discovery and verification of plasma protein biomarkers reveals candidate markers for cardiovascular disease Nature Biotechnology ·Terri A. Addona, Xu Shi, Hasmik Keshishian, D.R. Mani, Michael Burgess, Michael A. Gillette, Karl R. Clauser, Dongxiao Shen, Gregory D. Lewis, Laurie Farrell, Michael A. Fifer, Marc S. Sabatine, Robert E. Gerszten, Steven A. Carr	2011	193
11	Bead-based profiling of tyrosine kinase phosphorylation identifies SRC as a potential target for glioblastoma therapy Nature Biotechnology ·Jinyan Du, Paula Bernasconi, Karl R. Clauser, D.R. Mani, Stephen P. Finn, Rameen Beroukhim, Melissa Burns, Bina Julian, Xiao Peng, Haley Hieronymus, Rebecca L. Maglathlin, Timothy A. Lewis, Linda M. Liau, Phioanh L. Nghiemphu, Ingo K. Mellinghoff, David N. Louis, Massimo Loda, Steven A. Carr, Andrew L. Kung, Todd R. Golub	2008	192
12	A Curated Resource for Phosphosite-specific Signature Analysis Molecular & Cellular Proteomics ·Karsten Krug, Philipp Mertins, Bin Zhang, Peter Hornbeck, Rajesh Raju, Rushdy Ahmad, Matthew J. Szucs, Filip Mundt, Dominique Forestier, Judit Jané‐Valbuena, Hasmik Keshishian, Michael A. Gillette, Pablo Tamayo, Jill P. Mesirov, Jacob D. Jaffe, StevenA. Carr, D.R. Mani	2018	174
13	Multiplexed, Quantitative Workflow for Sensitive Biomarker Discovery in Plasma Yields Novel Candidates for Early Myocardial Injury Molecular & Cellular Proteomics ·Hasmik Keshishian, Michael Burgess, Michael A. Gillette, Philipp Mertins, Karl R. Clauser, D.R. Mani, Eric Kuhn, Laurie Farrell, Robert E. Gerszten, Steven A. Carr	2015	161
14	iTRAQ Labeling is Superior to mTRAQ for Quantitative Global Proteomics and Phosphoproteomics Molecular & Cellular Proteomics ·Philipp Mertins, Namrata D. Udeshi, Karl R. Clauser, D.R. Mani, Jinal Patel, Shao‐En Ong, Jacob D. Jaffe, Steven A. Carr	2011	154
15	Automated Detection of Inaccurate and Imprecise Transitions in Peptide Quantification by Multiple Reaction Monitoring Mass Spectrometry Clinical Chemistry ·Susan E. Abbatiello, D.R. Mani, Hasmik Keshishian, Steven A. Carr	2009	148
16	Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators Cell ·Jun Li, Shuo Han, Hongjie Li, Namrata D. Udeshi, Tanya Svinkina, D.R. Mani, Chuanyun Xu, Ricardo Guajardo, Qijing Xie, Tongchao Li, David J. Luginbuhl, Bing Wu, Colleen N. McLaughlin, Anthony Xie, Pornchai Kaewsapsak, Stephen R. Quake, Steven A. Carr, Alice Y. Ting, Liqun Luo	2020	132
17	Interlaboratory Evaluation of Automated, Multiplexed Peptide Immunoaffinity Enrichment Coupled to Multiple Reaction Monitoring Mass Spectrometry for Quantifying Proteins in Plasma Molecular & Cellular Proteomics ·Eric Kuhn, Jeffrey R. Whiteaker, D.R. Mani, Angela Jackson, Lei Zhao, Matthew E. Pope, Derek Smith, Keith Rivera, N. Leigh Anderson, Steven J. Skates, Terry W. Pearson, Amanda G. Paulovich, Steven A. Carr	2011	132
18	Cancer proteogenomics: current impact and future prospects Nature reviews. Cancer ·D.R. Mani, Karsten Krug, Bing Zhang, Shankha Satpathy, Karl R. Clauser, Li Ding, Matthew J. Ellis, Michael A. Gillette, Steven A. Carr	2022	129
19	Methods for Quantification of in vivo Changes in Protein Ubiquitination following Proteasome and Deubiquitinase Inhibition Molecular & Cellular Proteomics ·Namrata D. Udeshi, D.R. Mani, Thomas Eisenhaure, Philipp Mertins, Jacob D. Jaffe, Karl R. Clauser, Nir Hacohen, Steven A. Carr	2012	127
20	PEPPeR, a Platform for Experimental Proteomic Pattern Recognition Molecular & Cellular Proteomics ·Jacob D. Jaffe, D.R. Mani, Kyriacos C. Leptos, George M. Church, Michael A. Gillette, Steven A. Carr	2006	119

About D.R. Mani

D.R. Mani is a scholar working on Molecular Biology, Spectroscopy, Artificial Intelligence, Oncology and Cellular and Molecular Neuroscience, having authored 61 papers that have together received 5.8k indexed citations. Recurring topics across this work include Advanced Proteomics Techniques and Applications (28 papers), Mass Spectrometry Techniques and Applications (11 papers), Ubiquitin and proteasome pathways (8 papers), Protein Degradation and Inhibitors (6 papers), Metabolomics and Mass Spectrometry Studies (4 papers), Neurobiology and Insect Physiology Research (4 papers), Molecular Biology Techniques and Applications (4 papers) and Receptor Mechanisms and Signaling (3 papers). The work is most often cited by research in Spectroscopy (2.1k citations), Molecular Biology (3.6k citations), Cancer Research (468 citations), Genetics (291 citations) and Oncology (708 citations). D.R. Mani has collaborated with scholars based in United States, Canada and Germany. Frequent co-authors include Steven A. Carr, Karl R. Clauser, Michael A. Gillette, Philipp Mertins, Namrata D. Udeshi, Hasmik Keshishian, Michael Burgess, Eric Kuhn, Jacob D. Jaffe and Ruedi Aebersold. Their work appears in journals such as Molecular & Cellular Proteomics, Proceedings of the National Academy of Sciences, Nature Communications, Nature Biotechnology and Cell.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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D.R. Mani's Hit Papers

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