Jérôme Eeckhoute

29.5k citations

68 papers · 18.6k · 4 hit papers · h-index 37

Impact in

Molecular Biology top 0.1%
- Genomics and Chromatin Dynamics
- Epigenetics and DNA Methylation
- RNA Research and Splicing
- RNA modifications and cancer
- Cancer-related gene regulation
Cancer Research top 0.5%
- Cancer-related molecular mechanisms research

Papers in

Molecular Biology 44
- Genomics and Chromatin Dynamics 20
- RNA Research and Splicing 11
- Epigenetics and DNA Methylation 10
- FOXO transcription factor regulation 6
- Protein Degradation and Inhibitors 6
Genetics 16
- Estrogen and related hormone effects 6
- Diabetes and associated disorders 5

Co-authors: Myles Brown (14 shared papers)Clifford A. Meyer (7 shared papers)X. Shirley Liu (3 shared papers)Yong Zhang (2 shared papers)Wei Li (1 shared paper)Tao Liu (1 shared paper)Chad Nusbaum (1 shared paper)B Bernstein (1 shared paper)
Journals: Nucleic Acids Research (4 papers)FEBS Letters (4 papers)Molecular Endocrinology (4 papers)Genome Research (3 papers)Journal of Hepatology (3 papers)
Partner nations: France United States Belgium

In The Last Decade

Jérôme Eeckhoute

68 papers receiving 18.5k citations

Jérôme Eeckhoute's Hit Papers

align trajectories log scale

Model-based Analysis of ChIP-Seq (MACS) 2008 · 11.8k citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2008 Genome biology
2008 Cell
2006 Nature Genetics
2005 Cell

Peers

Countries citing papers authored by Jérôme Eeckhoute

Since Specialization

Citations

This map shows the geographic impact of Jérôme Eeckhoute's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jérôme Eeckhoute with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jérôme Eeckhoute more than expected).

Fields of papers citing papers by Jérôme Eeckhoute

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jérôme Eeckhoute. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jérôme Eeckhoute. The network helps show where Jérôme Eeckhoute may publish in the future.

Co-authors

The 25 scholars most cited alongside Jérôme Eeckhoute, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Jérôme Eeckhoute Line = papers co-authored together Jérôme Eeckhoute links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 68 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Model-based Analysis of ChIP-Seq (MACS) Genome biology ·Yong Zhang, Tao Liu, Clifford A. Meyer, Jérôme Eeckhoute, David S. Johnson, B Bernstein, Chad Nusbaum, R Myers, Myles Brown, Wei Li, X. Shirley Liu Hit paper breakdown →	2008	11755
2	Genome-wide analysis of estrogen receptor binding sites Nature Genetics ·Jason S. Carroll, Clifford A. Meyer, Jun S. Song, Wei Li, Timothy R. Geistlinger, Jérôme Eeckhoute, Alexander S. Brodsky, Erika Krasnickas Keeton, K. C. Fertuck, Giles Hall, Qianben Wang, Stefan Bekiranov, Victor Sementchenko, Edward A. Fox, Pamela A. Silver, T Gingeras, X. Shirley Liu, Myles Brown Hit paper breakdown →	2006	1082
3	Chromosome-Wide Mapping of Estrogen Receptor Binding Reveals Long-Range Regulation Requiring the Forkhead Protein FoxA1 Cell ·Jason S. Carroll, X. Shirley Liu, Alexander S. Brodsky, Wei Li, Clifford A. Meyer, Anna J. Szary, Jérôme Eeckhoute, Wenlin Shao, Eli V. Hestermann, Timothy R. Geistlinger, Edward A. Fox, Pamela A. Silver, Myles Brown Hit paper breakdown →	2005	1064
4	FoxA1 Translates Epigenetic Signatures into Enhancer-Driven Lineage-Specific Transcription Cell ·Mathieu Lupien, Jérôme Eeckhoute, Clifford A. Meyer, Qianben Wang, Yong Zhang, Wei Li, Jason S. Carroll, X. Shirley Liu, Myles Brown Hit paper breakdown →	2008	741
5	Rev-erb-α modulates skeletal muscle oxidative capacity by regulating mitochondrial biogenesis and autophagy Nature Medicine ·Estelle Woldt, Yasmine Sebti, Laura A. Solt, Christian Duhem, Steve Lancel, Jérôme Eeckhoute, Matthijs K. C. Hesselink, Charlotte Paquet, Stéphane Delhaye, Youseung Shin, Theodore M. Kamenecka, Gert Schaart, Philippe Lefèbvre, Rémi Nevière, Thomas P. Burris, Patrick Schrauwen, Bart Staels, Hélène Duez	2013	367
6	Distinct but complementary contributions of PPAR isotypes to energy homeostasis Journal of Clinical Investigation ·Vanessa Dubois, Jérôme Eeckhoute, Philippe Lefèbvre, Bart Staels	2017	292
7	Positive Cross-Regulatory Loop Ties GATA-3 to Estrogen Receptor α Expression in Breast Cancer Cancer Research ·Jérôme Eeckhoute, Erika Krasnickas Keeton, Mathieu Lupien, Susan A. Krum, Jason S. Carroll, Myles Brown	2007	279
8	Breast cancer risk–associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression Nature Genetics ·Richard Cowper‐Sal·lari, Xiaoyang Zhang, Jason Wright, Swneke D. Bailey, Michael D. Cole, Jérôme Eeckhoute, Jason H. Moore, Mathieu Lupien	2012	255
9	A cell-type-specific transcriptional network required for estrogen regulation of cyclin D1 and cell cycle progression in breast cancer Genes & Development ·Jérôme Eeckhoute, Jason S. Carroll, Timothy R. Geistlinger, Maria I. Torres‐Arzayus, Myles Brown	2006	228
10	Nuclear Receptor Subfamily 1 Group D Member 1 Regulates Circadian Activity of NLRP3 Inflammasome to Reduce the Severity of Fulminant Hepatitis in Mice Gastroenterology ·Benoît Pourcet, Mathilde Zecchin, Lise Ferri, Justine Beauchamp, Sadicha Sitaula, Cyrielle Billon, Stéphane Delhaye, Jonathan Vanhoutte, Alicia Mayeuf-Louchart, Quentin Thorel, Joel T. Haas, Jérôme Eeckhoute, David Dombrowicz, Christian Duhem, Alexis Boulinguiez, Steve Lancel, Yasmine Sebti, Thomas P. Burris, Bart Staels, Hélène Duez	2017	175
11	Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancers Genome Research ·Aurélien A. Sérandour, Stéphane Avner, Frédéric Percevault, Florence Demay, Maud Bizot, Céline Lucchetti-Miganeh, Frédérique Barloy-Hubler, Myles Brown, Mathieu Lupien, Raphaël Métivier, Gilles Salbert, Jérôme Eeckhoute	2011	172
12	Dynamic hydroxymethylation of deoxyribonucleic acid marks differentiation-associated enhancers Nucleic Acids Research ·Aurélien A. Sérandour, Stéphane Avner, Frédérik Oger, Maud Bizot, Frédéric Percevault, Céline Lucchetti-Miganeh, Gaëlle Palierne, Céline Gheeraert, Frédérique Barloy-Hubler, Christine Le Péron, Thierry Madigou, Emmanuelle Durand, Philippe Froguel, Bart Staels, Philippe Lefèbvre, Raphaël Métivier, Jérôme Eeckhoute, Gilles Salbert	2012	149
13	Growth factor stimulation induces a distinct ERα cistrome underlying breast cancer endocrine resistance Genes & Development ·Mathieu Lupien, Clifford A. Meyer, Shannon T. Bailey, Jérôme Eeckhoute, Jennifer Cook, Thomas Westerling, Xiaoyang Zhang, Jason S. Carroll, Daniel R. Rhodes, Xia Liu, Myles Brown	2010	125
14	Unique ERα Cistromes Control Cell Type-Specific Gene Regulation Molecular Endocrinology ·Susan A. Krum, Gustavo A. Miranda‐Carboni, Mathieu Lupien, Jérôme Eeckhoute, Jason S. Carroll, Myles Brown	2008	106
15	Pioneer factors: directing transcriptional regulators within the chromatin environment Trends in Genetics ·Luca Magnani, Jérôme Eeckhoute, Mathieu Lupien	2011	105
16	Differential Estrogen-Regulation of CXCL12 Chemokine Receptors, CXCR4 and CXCR7, Contributes to the Growth Effect of Estrogens in Breast Cancer Cells PLoS ONE ·Antoine Boudot, Gwenneg Kerdivel, Denis Habauzit, Jérôme Eeckhoute, François Le Dily, Gilles Flouriot, Michel Samson, Farzad Pakdel	2011	87
17	Cell-type selective chromatin remodeling defines the active subset of FOXA1-bound enhancers Genome Research ·Jérôme Eeckhoute, Mathieu Lupien, Clifford A. Meyer, Michael P. Verzi, Ramesh A. Shivdasani, X. Shirley Liu, Myles Brown	2009	86
18	Human Alternative Macrophages Populate Calcified Areas of Atherosclerotic Lesions and Display Impaired RANKL-Induced Osteoclastic Bone Resorption Activity Circulation Research ·Giulia Chinetti, Mehdi Daoudi, Mickaël Rosa, Manjula Vinod, Loı̈c Louvet, Corinne Copin, Mélanie Fanchon, Jonathan Vanhoutte, Bruno Derudas, Loïc Belloy, Stéphan Haulon, Christophe Zawadzki, Sophie Susen, Ziad A. Massy, Jérôme Eeckhoute, Bart Staels	2017	76
19	Definition of a FoxA1 Cistrome That Is Crucial for G1 to S-Phase Cell-Cycle Transit in Castration-Resistant Prostate Cancer Cancer Research ·Chunpeng Zhang, Liguo Wang, Dayong Wu, Hongyan Chen, Zhong Chen, Jennifer M. Thomas‐Ahner, Debra L. Zynger, Jérôme Eeckhoute, Jindan Yu, Jun Luo, Myles Brown, Steven K. Clinton, Kenneth P. Nephew, Tim H.‐M. Huang, Wěi Li, Qianben Wang	2011	74
20	Hepatocyte Nuclear Factor 4α Isoforms Originated from the P1 Promoter Are Expressed in Human Pancreatic β-Cells and Exhibit Stronger Transcriptional Potentials than P2 Promoter-Driven Isoforms Endocrinology ·Jérôme Eeckhoute, Ericka Moerman, Thomas Bouckenooghe, B. Lukoviak, François Pattou, Pierre Formstecher, Julie Kerr‐Conte, B. Vandewalle, Bernard Laine	2003	74

About Jérôme Eeckhoute

Jérôme Eeckhoute is a scholar working on Molecular Biology, Genetics, Surgery, Immunology and Cellular and Molecular Neuroscience, having authored 68 papers that have together received 18.6k indexed citations. Recurring topics across this work include Genomics and Chromatin Dynamics (20 papers), RNA Research and Splicing (11 papers), Epigenetics and DNA Methylation (10 papers), Pancreatic function and diabetes (8 papers), Estrogen and related hormone effects (6 papers), FOXO transcription factor regulation (6 papers), Protein Degradation and Inhibitors (6 papers) and Diabetes and associated disorders (5 papers). The work is most often cited by research in Molecular Biology (13.4k citations), Cancer Research (2.1k citations), Aging (231 citations), Genetics (3.3k citations) and Immunology (1.6k citations). Jérôme Eeckhoute has collaborated with scholars based in France, United States and Belgium. Frequent co-authors include Myles Brown, Clifford A. Meyer, X. Shirley Liu, Yong Zhang, Wei Li, Tao Liu, Chad Nusbaum, B Bernstein, David S. Johnson and R Myers. Their work appears in journals such as Nucleic Acids Research, FEBS Letters, Molecular Endocrinology, Genome Research and Journal of Hepatology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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Jérôme Eeckhoute

Jérôme Eeckhoute's Hit Papers

Peers

Countries citing papers authored by Jérôme Eeckhoute

Fields of papers citing papers by Jérôme Eeckhoute

All Works

About Jérôme Eeckhoute

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