Pan Du

9.8k citations

65 papers · 6.2k · 4 hit papers · h-index 28

Impact in

Cancer Research top 2%
- Cancer Genomics and Diagnostics
- Cancer-related molecular mechanisms research
Molecular Biology top 2%
- Epigenetics and DNA Methylation
- RNA modifications and cancer
- Bioinformatics and Genomic Networks
- Gene expression and cancer classification
- Metabolomics and Mass Spectrometry Studies

Papers in

Molecular Biology 28
- Bioinformatics and Genomic Networks 8
- Gene expression and cancer classification 7
- Epigenetics and DNA Methylation 6
Cancer Research 18
- Cancer Genomics and Diagnostics 14

Co-authors: Warren A. Kibbe (13 shared papers)Simon Lin (22 shared papers)Simon Lin (5 shared papers)Nadereh Jafari (6 shared papers)Lifang Hou (5 shared papers)Chiang‐Ching Huang (4 shared papers)Xiao Zhang (1 shared paper)Wolfgang Huber (1 shared paper)
Journals: Journal of Clinical Oncology (7 papers)PLoS ONE (4 papers)Bioinformatics (3 papers)Clinical Cancer Research (3 papers)Genome biology (2 papers)
Partner nations: United States China Australia

In The Last Decade

Pan Du

61 papers receiving 6.1k citations

Pan Du's Hit Papers

align trajectories log scale

Drug Resistance via Feedback Activation of Stat3 in Oncogene-Addicted Cancer Cells 2014 · 446 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2014 Cancer Cell
2010 BMC Bioinformatics
2008 Bioinformatics
2006 Bioinformatics

Peers

Countries citing papers authored by Pan Du

Since Specialization

Citations

This map shows the geographic impact of Pan Du's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Pan Du with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Pan Du more than expected).

Fields of papers citing papers by Pan Du

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Pan Du. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Pan Du. The network helps show where Pan Du may publish in the future.

Co-authors

The 25 scholars most cited alongside Pan Du, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Pan Du Line = papers co-authored together Pan Du links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 65 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	lumi: a pipeline for processing Illumina microarray Bioinformatics ·Pan Du, Warren A. Kibbe, Simon Lin Hit paper breakdown →	2008	1639
2	Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis BMC Bioinformatics ·Pan Du, Xiao Zhang, Chiang‐Ching Huang, Nadereh Jafari, Warren A. Kibbe, Lifang Hou, Simon Lin Hit paper breakdown →	2010	1447
3	Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching Bioinformatics ·Pan Du, Warren A. Kibbe, Simon Lin Hit paper breakdown →	2006	575
4	Drug Resistance via Feedback Activation of Stat3 in Oncogene-Addicted Cancer Cells Cancer Cell ·Ho-June Lee, Guanglei Zhuang, Yi Cao, Pan Du, Hyojin Kim, Jeff Settleman Hit paper breakdown →	2014	446
5	Model-based variance-stabilizing transformation for Illumina microarray data Nucleic Acids Research ·Simon Lin, Pan Du, Wolfgang Huber, Warren A. Kibbe	2008	415
6	Genome-Wide DNA Methylation Indicates Silencing of Tumor Suppressor Genes in Uterine Leiomyoma PLoS ONE ·Antònia Navarro, Ping Yin, Diana Monsivais, Simon Lin, Pan Du, Jian-Jun Wei, Serdar E. Bulun	2012	110
7	Diverse modes of genomic alteration in hepatocellular carcinoma Genome biology ·Suchit Jhunjhunwala, Zhaoshi Jiang, Eric Stawiski, Florian Gnad, Jinfeng Liu, Oleg Mayba, Pan Du, Jingyu Diao, Stephanie L. Johnson, Kwong-Fai Wong, Zhibo Gao, Yingrui Li, Thomas D. Wu, Sharookh B. Kapadia, Zora Modrušan, Dorothy French, John M. Luk, Somasekar Seshagiri, Zemin Zhang	2014	102
8	Genomics of Human Intracranial Aneurysm Wall Stroke ·Changbin Shi, Issam A. Awad, Nadereh Jafari, Simon Lin, Pan Du, Ziad A. Hage, Robert Shenkar, Christopher C. Getch, Markus Bredel, H. Hunt Batjer, Bernard R. Bendok	2009	101
9	Clinical and genomic insights into circulating tumor DNA-based alterations across the spectrum of metastatic hormone-sensitive and castrate-resistant prostate cancer EBioMedicine ·Manish Kohli, Winston Tan, Tiantian Zheng, Amy Wang, Carlos Montesinos, Calven Wong, Pan Du, Shidong Jia, Siddhartha Yadav, Lisa G. Horvath, Kate Mahon, Edmond M. Kwan, Heidi Fettke, Jianjun Yu, Arun Azad	2020	94
10	From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations Bioinformatics ·Pan Du, Gang Feng, Jared Flatow, Jie Song, Michelle Holko, Warren A. Kibbe, Simon Lin	2009	94
11	The Early Growth Response Gene Egr2 (Alias Krox20) Is a Novel Transcriptional Target of Transforming Growth Factor-β that Is Up-Regulated in Systemic Sclerosis and Mediates Profibrotic Responses American Journal Of Pathology ·Feng Fang, Kohtaro Ooka, Swati Bhattachyya, Jun Wei, Minghua Wu, Pan Du, Simon Lin, Francesco Del Galdo, Carol Feghali‐Bostwick, John Varga	2011	77
12	nuID: a universal naming scheme of oligonucleotides for Illumina, Affymetrix, and other microarrays Biology Direct ·Pan Du, Warren A. Kibbe, Simon Lin	2007	73
13	DNA methylation alterations in response to pesticide exposure in vitro Environmental and Molecular Mutagenesis ·Xiao Zhang, Andrew D. Wallace, Pan Du, Warren A. Kibbe, Nadereh Jafari, Hehuang Xie, Simon Lin, Andrea Baccarelli, Marcelo B. Soares, Lifang Hou	2012	70
14	DNA Methylation Profiling Defines Clinically Relevant Biological Subsets of Non–Small Cell Lung Cancer Clinical Cancer Research ·Walter Kim, Thomas Holcomb, Tom Januario, Pan Du, Marie Evangelista, Nithya Kartha, Leonardo Iniguez, Robert Soriano, Ling Huw, Howard M. Stern, Zora Modrušan, Somasekar Seshagiri, Garret M. Hampton, Lukas C. Amler, Richard Bourgon, Robert L. Yauch, David S. Shames	2012	66
15	Expression of Cyclophilin B is Associated with Malignant Progression and Regulation of Genes Implicated in the Pathogenesis of Breast Cancer American Journal Of Pathology ·Feng Fang, Ayanna J. Flegler, Pan Du, Simon Lin, Charles V. Clevenger	2008	65
16	Loss of NAPRT1 Expression by Tumor-Specific Promoter Methylation Provides a Novel Predictive Biomarker for NAMPT Inhibitors Clinical Cancer Research ·David S. Shames, Kristi Elkins, Kimberly Walter, Thomas Holcomb, Pan Du, Dane Mohl, Yang Xiao, Thinh Pham, Peter M. Haverty, Bianca M. Liederer, Xiaorong Liang, Robert L. Yauch, Thomas O’Brien, Richard Bourgon, Hartmut Koeppen, Lisa D. Belmont	2013	61
17	Modeling Gene Expression Networks Using Fuzzy Logic IEEE Transactions on Systems Man and Cybernetics Part B (Cybernetics) ·Pan Du, Jianwei Gong, Eve Syrkin Wurtele, Julie Dickerson	2005	53
18	Susceptibility to glaucoma: differential comparison of the astrocyte transcriptome from glaucomatous African American and Caucasian American donors Genome biology ·Thomas J. Lukas, Haixi Miao, Lin Chen, Sean M. Riordan, Wenjun Li, A. M. Crabb, Alexandria Wise, Pan Du, Simon Lin, M. Rosario Hernandez	2008	52
19	Genome-wide study of DNA methylation alterations in response to diazinon exposure in vitro Environmental Toxicology and Pharmacology ·Xiao Zhang, Andrew D. Wallace, Pan Du, Simon Lin, Andrea Baccarelli, Hongmei Jiang, Nadereh Jafari, Yinan Zheng, Hehuang Xie, Marcelo B. Soares, Warren A. Kibbe, Lifang Hou	2012	50
20	A collection of bioconductor methods to visualize gene-list annotations BMC Research Notes ·Gang Feng, Pan Du, Nancy Krett, Michael A. Tessel, Steven T. Rosen, Warren A. Kibbe, Simon Lin	2010	48

About Pan Du

Pan Du is a scholar working on Molecular Biology, Cancer Research, Surgery, Pulmonary and Respiratory Medicine and Oncology, having authored 65 papers that have together received 6.2k indexed citations. Recurring topics across this work include Cancer Genomics and Diagnostics (14 papers), Bioinformatics and Genomic Networks (8 papers), Bladder and Urothelial Cancer Treatments (7 papers), Gene expression and cancer classification (7 papers), Epigenetics and DNA Methylation (6 papers), Prostate Cancer Treatment and Research (5 papers), Cancer Immunotherapy and Biomarkers (4 papers) and Glaucoma and retinal disorders (3 papers). The work is most often cited by research in Cancer Research (775 citations), Molecular Biology (3.2k citations), Oncology (683 citations), Immunology (483 citations) and Genetics (640 citations). Pan Du has collaborated with scholars based in United States, China and Australia. Frequent co-authors include Warren A. Kibbe, Simon Lin, Simon Lin, Nadereh Jafari, Lifang Hou, Chiang‐Ching Huang, Xiao Zhang, Wolfgang Huber, Guanglei Zhuang and Yi Cao. Their work appears in journals such as Journal of Clinical Oncology, PLoS ONE, Bioinformatics, Clinical Cancer Research and Genome biology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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Pan Du's Hit Papers

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