Mark Yu. Borodovsky

35.8k citations
99 papers · 23.7k · 13 hit papers · h-index 44

Impact in

Papers in

    • RNA and protein synthesis mechanisms 53
    • Genomics and Phylogenetic Studies 49
    • Machine Learning in Bioinformatics 29
    • Fractal and DNA sequence analysis 9
    • RNA Research and Splicing 5
    • Protein Structure and Dynamics 5
    • Bacteriophages and microbial interactions 10

Mark Yu. Borodovsky

98 papers receiving 23.1k citations

Mark Yu. Borodovsky's Hit Papers

TSEBRA: transcript selector for BRAKER 2021 · 182 citations
1820+10+20Years since publication10002.0k3.0k4.0k5.0k

Peers

Mark Yu. Borodovsky
Comparison fields: 5 of 189
  • Endocrinology 1.2k
  • Horticulture 219
  • Molecular Biology 12.7k
  • Ecology 4.3k
  • Small Animals 1.1k
Replace Hamish McWilliam with:
Hamish McWilliam United Kingdom
Thomas Madden United States
Franck Valentin United Kingdom
Iain M. Wallace Canada
Nigel P. Brown United Kingdom
Gordon Blackshields Ireland
Henrik Nielsen Denmark
Aron Marchler‐Bauer United States
Adam Michael Phillippy United States
Christina A. Cuomo United States
Mark Yu. Borodovsky relative to Hamish McWilliam United Kingdom Hamish McWilliam's profile →
Citations per field
00.5×1.5×2×2.4×
Hamish McWilliam · 1×
Citations per year

Countries citing papers authored by Mark Yu. Borodovsky

Since Specialization
Citations

This map shows the geographic impact of Mark Yu. Borodovsky's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Mark Yu. Borodovsky with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Mark Yu. Borodovsky more than expected).

Fields of papers citing papers by Mark Yu. Borodovsky

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Mark Yu. Borodovsky. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Mark Yu. Borodovsky. The network helps show where Mark Yu. Borodovsky may publish in the future.

Co-authors

The 25 scholars most cited alongside Mark Yu. Borodovsky, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Mark Yu. Borodovsky Line = papers co-authored together Mark Yu. Borodovsky links everyone, so they are left out of the graph.

All Works

20 of 20 papers shown

Showing the 20 most-cited of 99 papers — load more, or switch the sort, to bring in the rest.

#Work
1
NCBI prokaryotic genome annotation pipeline
Hit paper breakdown →
20165027
2
The complete genome sequence of the gastric pathogen Helicobacter pylori
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19973083
3
Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii
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19961860
4
cag , a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factors
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19961670
5
Ab initio gene identification in metagenomic sequences
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20101371
6
The genome of woodland strawberry (Fragaria vesca)
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2010991
7
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database
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2021924
8
GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses
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2005822
9
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS
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2015753
10
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
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2014547
11 1993545
12
Whole-Genome Annotation with BRAKER
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2019455
13 2010437
14 2014370
15 2010356
16
GeneMark-EP+: eukaryotic gene prediction with self-training in the space of genes and proteins
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2020322
17 2015298
18 2012271
19 2014266
20 1996245

About Mark Yu. Borodovsky

Mark Yu. Borodovsky is a scholar working on Molecular Biology, Ecology, Plant Science, Aging and Genetics, having authored 99 papers that have together received 23.7k indexed citations. Recurring topics across this work include RNA and protein synthesis mechanisms (53 papers), Genomics and Phylogenetic Studies (49 papers), Machine Learning in Bioinformatics (29 papers), Bacteriophages and microbial interactions (10 papers), Fractal and DNA sequence analysis (9 papers), Bacterial Genetics and Biotechnology (5 papers), RNA Research and Splicing (5 papers) and Protein Structure and Dynamics (5 papers). The work is most often cited by research in Endocrinology (1.2k citations), Horticulture (219 citations), Molecular Biology (12.7k citations), Ecology (4.3k citations) and Small Animals (1.1k citations). Mark Yu. Borodovsky has collaborated with scholars based in United States, Russia and Germany. Frequent co-authors include Alexandre Lomsadze, Tatiana A. Tatusova, James Ostell, Vyacheslav Chetvernin, Azat J. Badretdin, Leonid Yu. Zaslavsky, Kim D. Pruitt, Eric P. Nawrocki, Michael N. DiCuccio and Mario Stanke. Their work appears in journals such as Nucleic Acids Research, Journal of Molecular Biology, Bioinformatics, Journal of Biomolecular Structure and Dynamics and Current Protocols in Bioinformatics.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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