Thomas Madden
Impact in
- Endocrinology top 0.2%
- Molecular Biology top 0.1%
- Genomics and Phylogenetic Studies
- RNA and protein synthesis mechanisms
Papers in
-
- Genomics and Phylogenetic Studies 12
- RNA and protein synthesis mechanisms 6
- Machine Learning in Bioinformatics 6
- Gene expression and cancer classification 3
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- Rheology and Fluid Dynamics Studies 3
- Co-authors
- George Coulouris (5 shared papers)Ning Ma (2 shared papers)Scott McGinnis (3 shared papers)Jian Ye (3 shared papers)Tatiana Tatusova (1 shared paper)Ioana Cutcutache (1 shared paper)Steve Rozen (1 shared paper)Margaret E. Johnson (1 shared paper)
- Journals
- Nucleic Acids Research (5 papers)BMC Bioinformatics (4 papers)The Journal of Chemical Physics (3 papers)Bioinformatics (2 papers)Biology Direct (1 paper)
- Partner nations
- United StatesFinlandSingapore
In The Last Decade
Thomas Madden
27 papers receiving 30.4k citations
Thomas Madden's Hit Papers
Peers
Comparison fields: 5 of 194
- Endocrinology 1.3k
- Molecular Biology 15.2k
- Ecology 5.8k
- Molecular Medicine 948
- Plant Science 6.3k
Countries citing papers authored by Thomas Madden
This map shows the geographic impact of Thomas Madden's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Thomas Madden with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Thomas Madden more than expected).
Fields of papers citing papers by Thomas Madden
This network shows the impact of papers produced by Thomas Madden. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Thomas Madden. The network helps show where Thomas Madden may publish in the future.
Co-authors
The 25 scholars most cited alongside Thomas Madden, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.
All Works
Showing the 20 most-cited of 28 papers — load more, or switch the sort, to bring in the rest.
| # | Work | ||
|---|---|---|---|
| 1 | BLAST+: architecture and applications Hit paper breakdown → | 2009 | 14644 |
| 2 | Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction Hit paper breakdown → | 2012 | 4565 |
| 3 | NCBI BLAST: a better web interface Hit paper breakdown → | 2008 | 3156 |
| 4 | BLAST: at the core of a powerful and diverse set of sequence analysis tools Hit paper breakdown → | 2004 | 1630 |
| 5 | BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences Hit paper breakdown → | 1999 | 1574 |
| 6 | BLAST: a more efficient report with usability improvements Hit paper breakdown → | 2013 | 979 |
| 7 | Database indexing for production MegaBLAST searches Hit paper breakdown → | 2008 | 948 |
| 8 | IgBLAST: an immunoglobulin variable domain sequence analysis tool Hit paper breakdown → | 2013 | 720 |
| 9 | Domain enhanced lookup time accelerated BLAST Hit paper breakdown → | 2012 | 632 |
| 10 | BLAST: improvements for better sequence analysis Hit paper breakdown → | 2006 | 542 |
| 11 | 1996 | 343 | |
| 12 | The BLAST Sequence Analysis Tool | 2013 | 277 |
| 13 | 1997 | 276 | |
| 14 | 2019 | 206 | |
| 15 | 1989 | 120 | |
| 16 | 2023 | 70 | |
| 17 | 1989 | 38 | |
| 18 | 2008 | 33 | |
| 19 | 2003 | 33 | |
| 20 | 1991 | 30 |
About Thomas Madden
Thomas Madden is a scholar working on Molecular Biology, Fluid Flow and Transfer Processes, Biomedical Engineering, Artificial Intelligence and Genetics, having authored 28 papers that have together received 30.9k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (12 papers), RNA and protein synthesis mechanisms (6 papers), Machine Learning in Bioinformatics (6 papers), Gene expression and cancer classification (3 papers), Rheology and Fluid Dynamics Studies (3 papers), Algorithms and Data Compression (2 papers), Microfluidic and Capillary Electrophoresis Applications (2 papers) and Intellectual Property and Patents (1 paper). The work is most often cited by research in Endocrinology (1.3k citations), Molecular Biology (15.2k citations), Ecology (5.8k citations), Molecular Medicine (948 citations) and Plant Science (6.3k citations). Thomas Madden has collaborated with scholars based in United States, Finland and Singapore. Frequent co-authors include George Coulouris, Ning Ma, Scott McGinnis, Jian Ye, Tatiana Tatusova, Ioana Cutcutache, Steve Rozen, Margaret E. Johnson, Richa Agarwala and Alejandro A. Schäffer. Their work appears in journals such as Nucleic Acids Research, BMC Bioinformatics, The Journal of Chemical Physics, Bioinformatics and Biology Direct.
Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.