Ilya E. Vorontsov

5k citations

35 papers · 3.3k · 2 hit papers · h-index 18

Impact in

Molecular Biology top 5%
- Genomics and Chromatin Dynamics
- Epigenetics and DNA Methylation
- Genomics and Phylogenetic Studies
- RNA Research and Splicing
- Bioinformatics and Genomic Networks
Cancer Research top 5%
- Cancer-related molecular mechanisms research

Papers in

Molecular Biology 31
- Genomics and Chromatin Dynamics 27
- Epigenetics and DNA Methylation 6
- RNA and protein synthesis mechanisms 2
- DNA Repair Mechanisms 2
Genetics 6
- Genetic Associations and Epidemiology 5
- Genomics and Rare Diseases 2

Co-authors: Ivan V. Kulakovskiy (26 shared papers)Vsevolod J. Makeev (17 shared papers)Yulia A. Medvedeva (6 shared papers)Vladimir B. Bajić (3 shared papers)Ivan Yevshin (6 shared papers)Fedor Kolpakov (6 shared papers)Alla D. Fedorova (4 shared papers)Ruslan Sharipov (2 shared papers)
Journals: Nucleic Acids Research (6 papers)Nature Communications (4 papers)Nature (2 papers)BMC Genomics (2 papers)Genome biology (2 papers)
Partner nations: Russia Switzerland Germany

In The Last Decade

Ilya E. Vorontsov

35 papers receiving 3.3k citations

Ilya E. Vorontsov's Hit Papers

align trajectories log scale

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis 2017 · 605 citations

What are hit papers?

Paper score: A paper's citations measured against the top-1% bar of its own field and year: the square root of citations ÷ bar, so 1 means right at the bar and 2 means four times its citations. The bar blends the citation counts that enter the top 1% of the paper's subfields in its year (weighted 89.5%), of those subfields over all years (0.5%) and of its year across all fields (10%); a subfield and year with fewer than 400 papers takes its year's bar. Papers from 2026 are not scored yet: in an unfinished year, when a paper appeared matters more than how it is cited.

Hit paper: A paper cited at least 1.5× the top-1% bar of its field and year: a paper score of at least √1.5.

2017 Nucleic Acids Research
2014 Nature

Peers

Countries citing papers authored by Ilya E. Vorontsov

Since Specialization

Citations

This map shows the geographic impact of Ilya E. Vorontsov's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ilya E. Vorontsov with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ilya E. Vorontsov more than expected).

Fields of papers citing papers by Ilya E. Vorontsov

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ilya E. Vorontsov. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ilya E. Vorontsov. The network helps show where Ilya E. Vorontsov may publish in the future.

Co-authors

The 25 scholars most cited alongside Ilya E. Vorontsov, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Ilya E. Vorontsov Line = papers co-authored together Ilya E. Vorontsov links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Showing the 20 most-cited of 35 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	A promoter-level mammalian expression atlas Nature ·Alistair R. R. Forrest, Hideya Kawaji, Michiel de Hoon, Timo Lassmann, Marina Lizio, Masayoshi Itoh, Nicolas Bertin, Erik Arner Hit paper breakdown →	2014	1500
2	HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis Nucleic Acids Research ·Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin, Ruslan Sharipov, Alla D. Fedorova, Eugene I Rumynskiy, Yulia A. Medvedeva, Arturo Magana-Mora Hit paper breakdown →	2017	605
3	EpiFactors: a comprehensive database of human epigenetic factors and complexes Database ·Yulia A. Medvedeva, Andreas Lennartsson, Rezvan Ehsani, Ivan V. Kulakovskiy, Ilya E. Vorontsov, Pouda Panahandeh, Grigory Khimulya, Takeya Kasukawa	2015	211
4	HOCOMOCO: a comprehensive collection of human transcription factor binding sites models Nucleic Acids Research ·Ivan V. Kulakovskiy, Yulia A. Medvedeva, Ulf Schaefer, Artem S. Kasianov, Ilya E. Vorontsov, Vladimir B. Bajić, Vsevolod J. Makeev	2012	180
5	HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models Nucleic Acids Research ·Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin, Anastasiia V. Soboleva, Artem S. Kasianov, Haitham Ashoor, Wail Ba-Alawi, Vladimir B. Bajić	2015	165
6	Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation Proceedings of the National Academy of Sciences ·Hiromasa Morikawa, Naganari Ohkura, Alexis Vandenbon, Masayoshi Itoh, Sayaka Nagao-Sato, Hideya Kawaji, Timo Lassmann, Piero Carninci	2014	119
7	Landscape of allele-specific transcription factor binding in the human genome Nature Communications ·Sergey Abramov, Alexandr Boytsov, Daria Bykova, Dmitry Penzar, Ivan Yevshin, Semyon K. Kolmykov, Marina V. Fridman, Alexander V. Favorov	2021	67
8	HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors Nucleic Acids Research ·Ilya E. Vorontsov, Irina A. Eliseeva, Arsenii O. Zinkevich, Mikhail Nikonov, Sergey Abramov, Alexandr Boytsov, Vasily Kamenets, Alexandra M Kasianova	2023	65
9	Jaccard index based similarity measure to compare transcription factor binding site models Algorithms for Molecular Biology ·Ilya E. Vorontsov, Ivan V. Kulakovskiy, Vsevolod J. Makeev	2013	62
10	FROM BINDING MOTIFS IN CHIP-SEQ DATA TO IMPROVED MODELS OF TRANSCRIPTION FACTOR BINDING SITES Journal of Bioinformatics and Computational Biology ·Ivan V. Kulakovskiy, V. G. Levitsky, Dmitry Y. Oshchepkov, Leonid O. Bryzgalov, Ilya E. Vorontsov, Vsevolod J. Makeev	2013	47
11	Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study Genome biology ·Giovanna Ambrosini, Ilya E. Vorontsov, Dmitry Penzar, Romain Groux, Oriol Fornés, Daria D. Nikolaeva, Benoît Ballester, Jan Grau	2020	43
12	EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexes Nucleic Acids Research ·Daria Marakulina, Ilya E. Vorontsov, Ivan V. Kulakovskiy, Andreas Lennartsson, Finn Drabløs, Yulia A. Medvedeva	2022	43
13	CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods Genome biology ·Shantanu Jain, Constantina Bakolitsa, Steven E. Brenner, Predrag Radivojac A, John Moult, Susanna Repo, Roger A. Hoskins, Gaia Andreoletti	2024	33
14	PERFECTOS-APE - Predicting Regulatory Functional Effect of SNPs by Approximate P-value Estimation Ilya E. Vorontsov, Ivan V. Kulakovskiy, Grigory Khimulya, Daria D. Nikolaeva, Vsevolod J. Makeev	2015	32
15	Genome-wide map of human and mouse transcription factor binding sites aggregated from ChIP-Seq data BMC Research Notes ·Ilya E. Vorontsov, Alla D. Fedorova, Ivan Yevshin, Ruslan Sharipov, Fedor Kolpakov, Vsevolod J. Makeev, Ivan V. Kulakovskiy	2018	22
16	Multiple single nucleotide polymorphisms in the first intron of the IL2RA gene affect transcription factor binding and enhancer activity Gene ·A. M. Schwartz, Д. Э. Демин, Ilya E. Vorontsov, A. S. Kasyanov, Lidia V. Putlyaeva, K. A. Tatosyan, Ivan V. Kulakovskiy, Dmitry V. Kuprash	2016	19
17	Early B-cell factor 1 (EBF1) is critical for transcriptional control of SLAMF1 gene in human B cells Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms ·A. M. Schwartz, Lidia V. Putlyaeva, М. Чович, Anna V. Klepikova, Kseniya A. Akulich, Ilya E. Vorontsov, Kirill V. Korneev, Sergey E. Dmitriev	2016	18
18	Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network Nature Communications ·Mathys Grapotte, Manu Saraswat, Chloé Bessière, Christophe Menichelli, Jordan A. Ramilowski, Jessica Severin, Yoshihide Hayashizaki, Masayoshi Itoh	2021	18
19	ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs Nucleic Acids Research ·Alexandr Boytsov, Sergey Abramov, Ariuna Z Aiusheeva, Alexandra M Kasianova, Eugene F. Baulin, Ivan A. Kuznetsov, Yurii S. Aulchenko, Semyon K. Kolmykov	2022	18
20	Negative selection maintains transcription factor binding motifs in human cancer BMC Genomics ·Ilya E. Vorontsov, Grigory Khimulya, Elena Lukianova, Daria D. Nikolaeva, Irina A. Eliseeva, Ivan V. Kulakovskiy, Vsevolod J. Makeev	2016	14

About Ilya E. Vorontsov

Ilya E. Vorontsov is a scholar working on Molecular Biology, Genetics, Cancer Research, Otorhinolaryngology and Neurology, having authored 35 papers that have together received 3.3k indexed citations. Recurring topics across this work include Genomics and Chromatin Dynamics (27 papers), Epigenetics and DNA Methylation (6 papers), Genetic Associations and Epidemiology (5 papers), RNA and protein synthesis mechanisms (2 papers), Cancer Genomics and Diagnostics (2 papers), DNA Repair Mechanisms (2 papers), Genomics and Rare Diseases (2 papers) and Cancer-related molecular mechanisms research (1 paper). The work is most often cited by research in Molecular Biology (2.1k citations), Cancer Research (329 citations), Genetics (556 citations), Immunology (254 citations) and Developmental Neuroscience (27 citations). Ilya E. Vorontsov has collaborated with scholars based in Russia, Switzerland and Germany. Frequent co-authors include Ivan V. Kulakovskiy, Vsevolod J. Makeev, Yulia A. Medvedeva, Vladimir B. Bajić, Ivan Yevshin, Fedor Kolpakov, Alla D. Fedorova, Ruslan Sharipov, Arturo Magana-Mora and Artem S. Kasianov. Their work appears in journals such as Nucleic Acids Research, Nature Communications, Nature, BMC Genomics and Genome biology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact

Ilya E. Vorontsov

Impact in

Papers in i

In The Last Decade

Ilya E. Vorontsov

Ilya E. Vorontsov's Hit Papers

Peers

Countries citing papers authored by Ilya E. Vorontsov

Fields of papers citing papers by Ilya E. Vorontsov

All Works

About Ilya E. Vorontsov

Explore authors with similar magnitude of impact

Papers in