Xiaochen Bo

14.4k citations

50 papers · 10.2k · 2 hit papers · h-index 20

Impact in

Molecular Biology top 1%
- Epigenetics and DNA Methylation
- Single-cell and spatial transcriptomics
- Bioinformatics and Genomic Networks
- Genomics and Phylogenetic Studies
- Genomics and Chromatin Dynamics
Cancer Research top 2%

Papers in

Computational Theory and Mathematics 16
- Computational Drug Discovery Methods 16
Molecular Biology 23
- Bioinformatics and Genomic Networks 6
- Genomics and Phylogenetic Studies 4
- Single-cell and spatial transcriptomics 3
- Machine Learning in Bioinformatics 2
- Epigenetics and DNA Methylation 2

Co-authors: Erqiang Hu (2 shared papers)Wenli Tang (2 shared papers)Tingze Feng (2 shared papers)Shuangbin Xu (2 shared papers)Guangchuang Yu (2 shared papers)Zehan Dai (2 shared papers)Lang Zhou (2 shared papers)Meijun Chen (2 shared papers)
Journals: Nature Communications (4 papers)Science China Life Sciences (3 papers)Briefings in Bioinformatics (2 papers)Advanced Science (2 papers)Journal of Clinical Investigation (1 paper)
Partner nations: China Singapore United States

In The Last Decade

Xiaochen Bo

45 papers receiving 10.1k citations

Xiaochen Bo's Hit Papers

align trajectories log scale

clusterProfiler 4.0: A universal enrichment tool for interpreting omics data 2021 · 8.8k citations

What are hit papers?

Paper score: A paper's citations measured against the top-1% bar of its own field and year: the square root of citations ÷ bar, so 1 means right at the bar and 2 means four times its citations. The bar blends the citation counts that enter the top 1% of the paper's subfields in its year (weighted 89.5%), of those subfields over all years (0.5%) and of its year across all fields (10%); a subfield and year with fewer than 400 papers takes its year's bar. Papers from 2026 are not scored yet: in an unfinished year, when a paper appeared matters more than how it is cited.

Hit paper: A paper cited at least 1.5× the top-1% bar of its field and year: a paper score of at least √1.5.

2021 The Innovation
2018 Molecular Cell

Peers

Countries citing papers authored by Xiaochen Bo

Since Specialization

Citations

This map shows the geographic impact of Xiaochen Bo's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Xiaochen Bo with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Xiaochen Bo more than expected).

Fields of papers citing papers by Xiaochen Bo

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Xiaochen Bo. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Xiaochen Bo. The network helps show where Xiaochen Bo may publish in the future.

Co-authors

The 25 scholars most cited alongside Xiaochen Bo, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Xiaochen Bo Line = papers co-authored together Xiaochen Bo links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 50 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	clusterProfiler 4.0: A universal enrichment tool for interpreting omics data The Innovation ·Tianzhi Wu, Erqiang Hu, Shuangbin Xu, Meijun Chen, Pingfan Guo, Zehan Dai, Tingze Feng, Lang Zhou Hit paper breakdown →	2021	8757
2	N6-Methyladenine DNA Modification in the Human Genome Molecular Cell ·Chuan‐Le Xiao, Song Zhu, Minghui He, De Chen, Ying Chen, Guoliang Yu, Jinbao Liu, Shuang Xie Hit paper breakdown →	2018	429
3	ggtreeExtra: Compact Visualization of Richly Annotated Phylogenetic Data Molecular Biology and Evolution ·Shuangbin Xu, Zehan Dai, Pingfan Guo, Xiaocong Fu, Shanshan Liu, Lang Zhou, Wenli Tang, Tingze Feng	2021	237
4	Impacts of the Plateau Environment on the Gut Microbiota and Blood Clinical Indexes in Han and Tibetan Individuals mSystems ·Zhilong Jia, Xiaojing Zhao, Xiaoshuang Liu, Le Zhao, Jinlong Shi, Lijun Hao, Zhenguo Xu, Qin Zhong	2020	72
5	Decitabine priming increases anti–PD-1 antitumor efficacy by promoting CD8+ progenitor exhausted T cell expansion in tumor models Journal of Clinical Investigation ·Xiang Li, Yaru Li, Liang Dong, Xingying Zhang, Chunmeng Wang, Meixia Chen, Xiaochen Bo, Hebing Chen	2023	66
6	A 472-SNP panel for pairwise kinship testing of second-degree relatives Forensic Science International Genetics ·Shaokang Mo, Zilin Ren, Yaran Yang, Ya-Cheng Liu, Jingjing Zhang, Huijuan Wu, Zhen Li, Xiaochen Bo	2018	52
7	Inferring transcription factor regulatory networks from single-cell ATAC-seq data based on graph neural networks Nature Machine Intelligence ·Hao Li, Yu Sun, Hao Hong, Xin Huang, Huan Tao, Qiya Huang, Longteng Wang, Kang Xu	2022	48
8	CGMega: explainable graph neural network framework with attention mechanisms for cancer gene module dissection Nature Communications ·Hao Li, Zebei Han, Yu Sun, Fu Wang, Pengzhen Hu, Yuang Gao, Xuemei Bai, Shiyu Peng	2024	48
9	Mosaic integration and knowledge transfer of single-cell multimodal data with MIDAS Nature Biotechnology ·Zhen He, Shuofeng Hu, Yaowen Chen, Sijing An, Jiahao Zhou, Runyan Liu, Junfeng Shi, Jing Wang	2024	48
10	High-resolution annotation of the mouse preimplantation embryo transcriptome using long-read sequencing Nature Communications ·Yunbo Qiao, Chao Ren, Shisheng Huang, Jie Yuan, Xingchen Liu, Jiao Jie Fan, Jianxiang Lin, Susu Wu	2020	34
11	π-HuB: the proteomic navigator of the human body Nature ·Fuchu He, Ruedi Aebersold, Mark S. Baker, Xiu‐Wu Bian, Xiaochen Bo, Daniel W. Chan, Cheng Chang, Luonan Chen	2024	34
12	Forensic nanopore sequencing of STRs and SNPs using Verogen’s ForenSeq DNA Signature Prep Kit and MinION International Journal of Legal Medicine ·Zilin Ren, Jiarong Zhang, Xiaomeng Zhang, Liu Xu, Yanfeng Lin, Mengchun Wang, Jinding Liu, Peng Li	2021	32
13	An enhanced cascade-based deep forest model for drug combination prediction Briefings in Bioinformatics ·Weiping Lin, Lianlian Wu, Yixin Zhang, Yuqi Wen, Bowei Yan, Kunhong Liu, Song He, Xiaochen Bo +1 other	2021	32
14	Inhibition of Histone Deacetylation by MS-275 Alleviates Colitis by Activating the Vitamin D Receptor Journal of Crohn s and Colitis ·Chunxiao Li, Yi Chen, Hua-Tuo Zhu, Xiuming Zhang, Lu Han, Zuodong Zhao, Jinghua Wang, Longgui Ning	2020	28
15	Machine learning reshapes the paradigm of nanomedicine research Acta Pharmaceutica Sinica B ·Ziye Wei, Lianlian Wu, Xiang Gao, Song He, Xiaochen Bo, Wenhu Zhou +2 others	2025	28
16	Phylogenomic analysis unravels evolution of yellow fever virus within hosts PLoS neglected tropical diseases ·Chen Chen, Dong Jiang, Ming Ni, Jing Li, Zhihai Chen, Jingyuan Liu, Hanhui Ye, Gary Wong	2018	23
17	Evidential deep learning-based drug-target interaction prediction Nature Communications ·Yanpeng Zhao, Yixin Zhang, Yifei Wang, Chengkun Wu, Shangze Li, Huiyan Xu, Hongyang Zhang, Ziyi Liu	2025	23
18	Assessment of two‐pool multiplex long‐amplicon nanopore sequencing of SARS‐CoV‐2 Journal of Medical Virology ·Hongjie Liu, Xiaochen Bo, Hongbin Song, Kuibiao Li, Peng Li, Ming Ni +2 others	2021	22
19	Engineered T cells and their therapeutic applications in autoimmune diseases 动物学研究 ·Lei Bao, Xiaochen Bo, Huai-Wen Cao, Zeng WANG, Bin Li +2 others	2022	22
20	Dynamic Interplay between Structural Variations and 3D Genome Organization in Pancreatic Cancer Advanced Science ·Yongxing Du, Zongting Gu, Zongze Li, Zan Yuan, Yue Zhao, Xiaohao Zheng, Xiaochen Bo, Hebing Chen	2022	20

About Xiaochen Bo

Xiaochen Bo is a scholar working on Computational Theory and Mathematics, Molecular Biology, Cancer Research, Genetics and Infectious Diseases, having authored 50 papers that have together received 10.2k indexed citations. Recurring topics across this work include Computational Drug Discovery Methods (16 papers), Bioinformatics and Genomic Networks (6 papers), Genomics and Phylogenetic Studies (4 papers), Single-cell and spatial transcriptomics (3 papers), Cancer Genomics and Diagnostics (3 papers), Cancer-related molecular mechanisms research (2 papers), Machine Learning in Bioinformatics (2 papers) and Epigenetics and DNA Methylation (2 papers). The work is most often cited by research in Molecular Biology (3.6k citations), Cancer Research (673 citations), Aging (81 citations), Oncology (939 citations) and Immunology (660 citations). Xiaochen Bo has collaborated with scholars based in China, Singapore and United States. Frequent co-authors include Erqiang Hu, Wenli Tang, Tingze Feng, Shuangbin Xu, Guangchuang Yu, Zehan Dai, Lang Zhou, Meijun Chen, Tianzhi Wu and Li Zhan. Their work appears in journals such as Nature Communications, Science China Life Sciences, Briefings in Bioinformatics, Advanced Science and Journal of Clinical Investigation.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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Xiaochen Bo

Xiaochen Bo's Hit Papers

Peers

Countries citing papers authored by Xiaochen Bo

Fields of papers citing papers by Xiaochen Bo

All Works

About Xiaochen Bo

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