Thomas E. Cheatham
Impact in
- Molecular Biology top 0.05%
- DNA and Nucleic Acid Chemistry
- Protein Structure and Dynamics
- RNA and protein synthesis mechanisms
- Advanced biosensing and bioanalysis techniques
- RNA Interference and Gene Delivery
- Computational Theory and Mathematics top 0.05%
- Computational Drug Discovery Methods
Papers in
-
- DNA and Nucleic Acid Chemistry 97
- RNA and protein synthesis mechanisms 78
- Protein Structure and Dynamics 41
- Advanced biosensing and bioanalysis techniques 29
-
- Scientific Computing and Data Management 18
- Co-authors
- Daniel R. Roe (17 shared papers)David Andrew Case (12 shared papers)In Suk Joung (3 shared papers)Peter A. Kollman (18 shared papers)Jiřı́ Šponer (27 shared papers)Tom Darden (4 shared papers)Piotr Cieplak (5 shared papers)Carlos L. Simmerling (1 shared paper)
- Journals
- Journal of Chemical Theory and Computation (21 papers)The Journal of Physical Chemistry B (15 papers)Journal of the American Chemical Society (11 papers)Journal of Chemical Information and Modeling (9 papers)Biophysical Journal (9 papers)
- Partner nations
- United StatesCzechiaGermany
In The Last Decade
Thomas E. Cheatham
201 papers receiving 42.5k citations
Thomas E. Cheatham's Hit Papers
Peers
Comparison fields: 5 of 198
- Molecular Biology 30.8k
- Computational Theory and Mathematics 4.3k
- Physical and Theoretical Chemistry 1.7k
- Virology 718
- Spectroscopy 2.6k
Countries citing papers authored by Thomas E. Cheatham
This map shows the geographic impact of Thomas E. Cheatham's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Thomas E. Cheatham with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Thomas E. Cheatham more than expected).
Fields of papers citing papers by Thomas E. Cheatham
This network shows the impact of papers produced by Thomas E. Cheatham. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Thomas E. Cheatham. The network helps show where Thomas E. Cheatham may publish in the future.
Co-authors
The 25 scholars most cited alongside Thomas E. Cheatham, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.
All Works
Showing the 20 most-cited of 206 papers — load more, or switch the sort, to bring in the rest.
| # | Work | ||
|---|---|---|---|
| 1 | The Amber biomolecular simulation programs Hit paper breakdown → | 2005 | 8035 |
| 2 | PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data Hit paper breakdown → | 2013 | 5900 |
| 3 | Calculating Structures and Free Energies of Complex Molecules: Combining Molecular Mechanics and Continuum Models Hit paper breakdown → | 2000 | 4284 |
| 4 | Determination of Alkali and Halide Monovalent Ion Parameters for Use in Explicitly Solvated Biomolecular Simulations Hit paper breakdown → | 2008 | 2939 |
| 5 | AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules Hit paper breakdown → | 1995 | 2779 |
| 6 | Refinement of the AMBER Force Field for Nucleic Acids: Improving the Description of α/γ Conformers Hit paper breakdown → | 2007 | 1940 |
| 7 | Continuum Solvent Studies of the Stability of DNA, RNA, and Phosphoramidate−DNA Helices Hit paper breakdown → | 1998 | 1437 |
| 8 | AmberTools Hit paper breakdown → | 2023 | 1163 |
| 9 | Refinement of the Cornell et al. Nucleic Acids Force Field Based on Reference Quantum Chemical Calculations of Glycosidic Torsion Profiles Hit paper breakdown → | 2011 | 934 |
| 10 | A Modified Version of the Cornell et al. Force Field with Improved Sugar Pucker Phases and Helical Repeat Hit paper breakdown → | 1999 | 861 |
| 11 | Molecular Dynamics Simulations on Solvated Biomolecular Systems: The Particle Mesh Ewald Method Leads to Stable Trajectories of DNA, RNA, and Proteins Hit paper breakdown → | 1995 | 748 |
| 12 | Clustering Molecular Dynamics Trajectories: 1. Characterizing the Performance of Different Clustering Algorithms Hit paper breakdown → | 2007 | 744 |
| 13 | Molecular Dynamics Simulations of the Dynamic and Energetic Properties of Alkali and Halide Ions Using Water-Model-Specific Ion Parameters Hit paper breakdown → | 2009 | 498 |
| 14 | Refinement of the Sugar–Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA Hit paper breakdown → | 2015 | 437 |
| 15 | Assessing the Current State of Amber Force Field Modifications for DNA Hit paper breakdown → | 2016 | 427 |
| 16 | 1998 | 338 | |
| 17 | 2010 | 330 | |
| 18 | 2000 | 301 | |
| 19 | 2000 | 288 | |
| 20 | 2009 | 269 |
About Thomas E. Cheatham
Thomas E. Cheatham is a scholar working on Molecular Biology, Information Systems and Management, Hardware and Architecture, Ecology and Information Systems, having authored 206 papers that have together received 43.1k indexed citations. Recurring topics across this work include DNA and Nucleic Acid Chemistry (97 papers), RNA and protein synthesis mechanisms (78 papers), Protein Structure and Dynamics (41 papers), Advanced biosensing and bioanalysis techniques (29 papers), Bacteriophages and microbial interactions (21 papers), Scientific Computing and Data Management (18 papers), Distributed and Parallel Computing Systems (16 papers) and Logic, programming, and type systems (14 papers). The work is most often cited by research in Molecular Biology (30.8k citations), Computational Theory and Mathematics (4.3k citations), Physical and Theoretical Chemistry (1.7k citations), Virology (718 citations) and Spectroscopy (2.6k citations). Thomas E. Cheatham has collaborated with scholars based in United States, Czechia and Germany. Frequent co-authors include Daniel R. Roe, David Andrew Case, In Suk Joung, Peter A. Kollman, Jiřı́ Šponer, Tom Darden, Piotr Cieplak, Carlos L. Simmerling, Holger Gohlke and Ray Luo. Their work appears in journals such as Journal of Chemical Theory and Computation, The Journal of Physical Chemistry B, Journal of the American Chemical Society, Journal of Chemical Information and Modeling and Biophysical Journal.
Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.