Ramya Rangan

2.6k citations

19 papers · 1.5k · 1 hit paper · h-index 15

Impact in

Structural Biology top 5%
Molecular Biology top 10%
- RNA and protein synthesis mechanisms
- RNA modifications and cancer
- RNA Research and Splicing
- Protein Structure and Dynamics
- Advanced biosensing and bioanalysis techniques

Papers in

Molecular Biology 19
- RNA and protein synthesis mechanisms 16
- RNA modifications and cancer 11
- RNA Research and Splicing 6
- Protein Structure and Dynamics 3
- Genomics and Phylogenetic Studies 2
Structural Biology 2
- Advanced Electron Microscopy Techniques and Applications 2

Co-authors: Rhiju Das (14 shared papers)Andrew M. Watkins (5 shared papers)Ivan N. Zheludev (4 shared papers)Raphael J.L. Townshend (1 shared paper)Stephan Eismann (1 shared paper)Ron O. Dror (1 shared paper)Masha Karelina (1 shared paper)Edward A. Pham (2 shared papers)
Journals: Nature Methods (3 papers)Nature (2 papers)Proteins Structure Function and Bioinformatics (2 papers)Nature Structural & Molecular Biology (2 papers)Journal of Chemical Theory and Computation (1 paper)
Partner nations: United States China United Kingdom

In The Last Decade

Ramya Rangan

19 papers receiving 1.4k citations

Ramya Rangan's Hit Papers

align trajectories log scale

Geometric deep learning of RNA structure 2021 · 270 citations

What are hit papers?

Paper score: A paper's citations measured against the top-1% bar of its own field and year: the square root of citations ÷ bar, so 1 means right at the bar and 2 means four times its citations. The bar blends the citation counts that enter the top 1% of the paper's subfields in its year (weighted 89.5%), of those subfields over all years (0.5%) and of its year across all fields (10%); a subfield and year with fewer than 400 papers takes its year's bar. Papers from 2026 are not scored yet: in an unfinished year, when a paper appeared matters more than how it is cited.

Hit paper: A paper cited at least 1.5× the top-1% bar of its field and year: a paper score of at least √1.5.

2021 Science

Peers

Countries citing papers authored by Ramya Rangan

Since Specialization

Citations

This map shows the geographic impact of Ramya Rangan's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ramya Rangan with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ramya Rangan more than expected).

Fields of papers citing papers by Ramya Rangan

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ramya Rangan. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ramya Rangan. The network helps show where Ramya Rangan may publish in the future.

Co-authors

The 25 scholars most cited alongside Ramya Rangan, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Ramya Rangan Line = papers co-authored together Ramya Rangan links everyone, so they are left out of the graph.

All Works

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19 of 19 papers shown

#	Work
1	Geometric deep learning of RNA structure Science ·Raphael J.L. Townshend, Stephan Eismann, Andrew M. Watkins, Ramya Rangan, Masha Karelina, Rhiju Das, Ron O. Dror Hit paper breakdown →	2021	270
2	RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses: a first look RNA ·Ramya Rangan, Ivan N. Zheludev, Rachel J. Hagey, Edward A. Pham, Hannah K. Wayment-Steele, Jeffrey S. Glenn, Rhiju Das	2020	192
3	FARFAR2: Improved De Novo Rosetta Prediction of Complex Global RNA Folds Structure ·Andrew M. Watkins, Ramya Rangan, Rhiju Das	2020	169
4	Structure of human telomerase holoenzyme with bound telomeric DNA Nature ·George E. Ghanim, Adam J. Fountain, Anne‐Marie M. van Roon, Ramya Rangan, Rhiju Das, Kathleen E. Collins, Thi Hoang Duong Nguyen	2021	137
5	Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures Nature Methods ·Kalli Kappel, Kaiming Zhang, Zhaoming Su, Andrew M. Watkins, Wipapat Kladwang, Shanshan Li, Grigore D Pintilie, Ved V. Topkar	2020	135
6	Cryo-EM and antisense targeting of the 28-kDa frameshift stimulation element from the SARS-CoV-2 RNA genome Nature Structural & Molecular Biology ·Kaiming Zhang, Ivan N. Zheludev, Rachel J. Hagey, Raphael Haslecker, Yixuan Jacob Hou, Rachael C. Kretsch, Grigore D Pintilie, Ramya Rangan	2021	124
7	Assessment of three‐dimensional RNA structure prediction in CASP15 Proteins Structure Function and Bioinformatics ·Rhiju Das, Rachael C. Kretsch, Adam J. Simpkin, Thomas Mulvaney, Phillip H. Pham, Ramya Rangan, Fan Bu, Ronan M. Keegan	2023	94
8	Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 Å resolution Nature ·Zhaoming Su, Kaiming Zhang, Kalli Kappel, Shanshan Li, Michael Z. Palo, Grigore D Pintilie, Ramya Rangan, Bingnan Luo	2021	74
9	De novo 3D models of SARS-CoV-2 RNA elements from consensus experimental secondary structures Nucleic Acids Research ·Ramya Rangan, Andrew M. Watkins, Jose Chacon, Rachael C. Kretsch, Wipapat Kladwang, Ivan N. Zheludev, Jill Townley, Mats Rynge	2021	59
10	Determination of Structural Ensembles of Proteins: Restraining vs Reweighting Journal of Chemical Theory and Computation ·Ramya Rangan, Massimiliano Bonomi, Gabriella T. Heller, Andrea Cesari, Giovanni Bussi, Michele Vendruscolo	2018	52
11	New prediction categories in CASP15 Proteins Structure Function and Bioinformatics ·Andriy Kryshtafovych, Maciej Antczak, Marta Szachniuk, Tomasz Żok, Rachael C. Kretsch, Ramya Rangan, Phillip H. Pham, Rhiju Das	2023	43
12	RNA-Puzzles Round V: blind predictions of 23 RNA structures Nature Methods ·Fan Bu, Yagoub Adam, Ryszard W. Adamiak, Maciej Antczak, Belisa R. H. de Aquino, Nagendar Goud Badepally, Robert Batey, Eugene F. Baulin	2024	36
13	CryoDRGN-ET: deep reconstructing generative networks for visualizing dynamic biomolecules inside cells Nature Methods ·Ramya Rangan, Ryan W. Feathers, Sagar Khavnekar, Adam K. Lerer, Jake D. Johnston, Ron Kelley, Martin Obr, Abhay Kotecha	2024	22
14	Diversity of ribosomes at the level of rRNA variation associated with human health and disease Cell Genomics ·Daphna Rothschild, Teodorus Theo Susanto, Xin Sui, J. Edward Spence, Ramya Rangan, Naomi R. Genuth, Nasa Sinnott-Armstrong, Xiao Wang	2024	17
15	Using Rosetta for RNA homology modeling Methods in enzymology on CD-ROM/Methods in enzymology ·Andrew M. Watkins, Ramya Rangan, Rhiju Das	2019	17
16	PyRosetta Jupyter Notebooks Teach Biomolecular Structure Prediction and Design PubMed ·Kathy H. Le, Jared Adolf‐Bryfogle, Jason C. Klima, Sergey Lyskov, Jason W. Labonte, Steven J. Bertolani, Shourya S. Roy Burman, Andrew Leaver‐Fay	2021	12
17	Auto-DRRAFTER: Automated RNA Modeling Based on Cryo-EM Density Methods in molecular biology ·Haiyun Ma, Phillip H. Pham, Bingnan Luo, Ramya Rangan, Kalli Kappel, Zhaoming Su, Rhiju Das	2022	12
18	Anomalous Reverse Transcription through Chemical Modifications in Polyadenosine Stretches Biochemistry ·Wipapat Kladwang, Ved V. Topkar, Bei Liu, Ramya Rangan, Tracy L. Hodges, Sarah C. Keane, Hashim M. Al‐Hashimi, Rhiju Das	2020	8
19	Comprehensive analysis of Saccharomyces cerevisiae intron structures in vivo Nature Structural & Molecular Biology ·Ramya Rangan, Rui Huang, Oarteze Hunter, Phillip H. Pham, Manuel Ares, Rhiju Das	2025	2

About Ramya Rangan

Ramya Rangan is a scholar working on Molecular Biology, Structural Biology, Ecology, Biophysics and Cancer Research, having authored 19 papers that have together received 1.5k indexed citations. Recurring topics across this work include RNA and protein synthesis mechanisms (16 papers), RNA modifications and cancer (11 papers), RNA Research and Splicing (6 papers), Bacteriophages and microbial interactions (3 papers), Protein Structure and Dynamics (3 papers), Genomics and Phylogenetic Studies (2 papers), Advanced Electron Microscopy Techniques and Applications (2 papers) and Viral gastroenteritis research and epidemiology (1 paper). The work is most often cited by research in Structural Biology (62 citations), Molecular Biology (1.2k citations), Infectious Diseases (202 citations), Aging (17 citations) and Cardiology and Cardiovascular Medicine (109 citations). Ramya Rangan has collaborated with scholars based in United States, China and United Kingdom. Frequent co-authors include Rhiju Das, Andrew M. Watkins, Ivan N. Zheludev, Raphael J.L. Townshend, Stephan Eismann, Ron O. Dror, Masha Karelina, Edward A. Pham, Jeffrey S. Glenn and Rachel J. Hagey. Their work appears in journals such as Nature Methods, Nature, Proteins Structure Function and Bioinformatics, Nature Structural & Molecular Biology and Journal of Chemical Theory and Computation.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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Ramya Rangan

Ramya Rangan's Hit Papers

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